Publications 2020 issues des financements CEMEB

Explotary projects, ERJ, doctoral and post-doct, labeled platforms and invited scientists

Aguilera O, Araújo OMOd, Hendy A, Nogueira AAE, Nogueira ACR, Maurity CW, Kutter VT, Martins MA, Coletti G, Dias BB, Silva-Caminha SAF, Bencomo K, Lopes RT, Jaramillo C (2020) Palaeontological framework from Pirabas Formation (North  Brazil) used as potential model for equatorial carbonate platform. Marine Micropaleontology 154: 101813. [Chercheur invité CeMEB]

Allio R, Schomaker-Bastos A, Romiguier J, Prosdocimi F, Nabholz B, Delsuc F (2020a) MitoFinder: Efficient automated large-scale extraction of mitogenomic data in target enrichment phylogenomics. Molecular Ecology Resources 20 (4): 892-905. [Plateforme MBB]

Allio R, Scornavacca C, Nabholz B, Clamens AL, Sperling FA, Condamine FL (2020b) Whole genome shotgun phylogenomics resolves the pattern and timing of swallowtail butterfly evolution. Systematic Biology 69 (1): 38-60. [Plateforme MBB]

Alonso P, Blondin L, Gladieux P, Mahe F, Sanguin H, Ferdinand R, Filloux D, Desmarais E, Cerqueira F, Jin BH, Huang HC, He XH, Morel JB, Martin DP, Roumagnac P, Verniere C (2020) Heterogeneity of the rice microbial community of the Chinese centuries-old Honghe Hani rice terraces system. Environmental Microbiology 22 (8): 3429-3445. [Plateforme GenSeq]

Altinli M, Lequime S, Atyame C, Justy F, Weill M, Sicard M (2020) Wolbachia modulates prevalence and viral load of Culex pipiens densoviruses in natural populations. Molecular Ecology 29 (20): 4000-4013. [Plateforme GenSeq]

Angell CS, Oudin MJ, Rode NO, Mautz BS, Bonduriansky R, Rundle HD (2020) Development time mediates the effect of larval diet on ageing and mating success of male antler flies in the wild. Proceedings of the Royal Society B: Biological Sciences 287 (1938): 20201876. [Post-doctorat Cemeb]

Assemat A, Mourlam M, Orliac MJ (2020) 3D models related to the publication: The  ossicular chain of Cainotheriidae (Mammalia, Artiodactyla). MorphoMuseuM 6: e110. [Plateforme Microtomographie RX]

Assogba BS, Pasteur N, Makoundou P, Unal S, Baba-Moussa L, Labbe P, Weill M (2020) Dynamic of resistance alleles of two major insecticide targets in Anopheles gambiae (s.l.) populations from Benin, West Africa. Parasites & Vectors 13 (1): 134. [Plateforme GenSeq]

Bas C, Imbert I, Clermont S, Reinert ME, Calvet C, Berté C, Vaissière A-C (2020) Approches anticipées et planifiées de la compensation écologique en Allemagne : vers un retour d'expérience pour la France ? Sciences, Eaux & Territoires 31: 44-48. [Post-doctorat Cemeb]

Battie-Laclau P, Taschen E, Plassard C, Dezette D, Abadie J, Arnal D, Benezech P, Duthoit M, Pablo AL, Jourdan C, Laclau JP, Bertrand I, Taudiere A, Hinsinger P (2020) Role of trees and herbaceous vegetation beneath trees in maintaining arbuscular mycorrhizal communities in temperate alley cropping systems. Plant and Soil 453 (1- 2): 153-171. [Plateforme TE]

Berio F, Evin A, Goudemand N, Debiais‐Thibaud M (2020) The intraspecific diversity of tooth morphology in the large‐spotted catshark Scyliorhinus stellaris: insights into the ontogenetic cues driving sexual dimorphism. Journal of Anatomy 237: 960-978. [Plateforme Microtomographie RX]

Besnard G, Cheptou P-O, Debbaoui M, Lafont P, Hugueny B, Dupin J, BaaliCherif D (2020) Paternity tests support a di-allelic self-incompatibility system in a wild olive (Oleaeuropaea subsp. laperrinei, Oleaceae). Ecology and Evolution 10 (4): 1876-1888. [Plateforme TE]

Binetruy F, Buysse M, Lejarre Q, Barosi R, Villa M, Rahola N, Paupy C, Ayala D, Duron O (2020a) Microbial community structure reveals instability of nutritional symbiosis during the evolutionary radiation of Amblyomma ticks. Molecular Ecology 29 (5): 1016-1029. [Plateforme GenSeq]

Binetruy F, Garnier S, Boulanger N, Talagrand-Reboul E, Loire E, Faivre B, Noel V, Buysse M, Duron O (2020b) A novel Borrelia species, intermediate between Lyme disease and relapsing fever groups, in neotropical passerine-associated ticks. Scientific  Reports 10 (1): 10596. [Plateforme GenSeq]

Brauman A, Thoumazeau A (2020) Biofunctool (R) : un outil de terrain pour évaluer la santé des sols, basé sur la mesure de fonctions issues de l'activité des organismes du sol. Etude et Gestion des sols 27 (1): 289-303. [Plateforme EcoTrop]

Bsaibes S, Piel F, Gros V, Truong F, Lafouge F, Ciuraru R, Buysse P, Kammer J, Loubet B, Staudt M (2020) Monoterpene chemical speciation with high time resolution using a FastGC/PTR-MS: Results from the COV3ER experiment on Quercus ilexAtmosphere 11 (7): 690. [Plateforme TE]

Burban C, Rocha S, Leblois R, Rossi J-P, Sauné L, Branco M, Kerdelhué C (2020) From sympatry to parapatry: a rapid change in the spatial context of incipient allochronic speciation. Evolutionary Ecology 34 (1): 101-121. [Plateforme GenSeq]

Calvet C, Delbar V, Chapron P, Brasebin M, Perret J, Moulherat S (2020) La biodiversité à l'épreuve des choix d'aménagement : une approche par la modélisation appliquée à la région Occitanie. Sciences, Eaux & Territoires 31: 24-31. [Post-doctorat Cemeb]

Chambert T, Imberdis L, Couloumy C, Bonet R, Besnard A (2020) Density dependence in Golden Eagle Aquila chrysaetos fecundity better explained by individual adjustment than territory heterogeneity. Ibis 162 (4): 1312-1323. [Post-doctorat Cemeb]

Champreux A, Meyer-Berthaud B, Decombeix A-L (2020) Keraphyton gen. nov., a new Late Devonian fern-like plant from Australia. PeerJ 8: e9321. [Projet exploratoire Cemeb]

Coq S, Nahmani J, Kazakou E, Fromin N, David J-F (2020) Do litter-feeding  macroarthropods disrupt cascading effects of land use on microbial decomposer activity? Basic and Applied Ecology 46: 24-34. [Plateforme TE & Plateforme PACE]

D’Hervilly C, Marsden C, Hedde M, Bertrand I (2020) Sown understory vegetation strips impact soil chemical fertility, associated microorganisms and macro-invertebrates in two temperate alley cropping systems. Agroforestry Systems 94 (5): 1851-1864. [Plateforme EcoTrop]

Daussy J, Staudt M (2020) Do future climate conditions change volatile organic compound emissions from Artemisia annua? Elevated CO2 and temperature modulate actual VOC emission rate but not its emission capacity. Atmospheric Environment: X 7: 100082. [Plateforme TE & Plateforme PACE]

de Carvalho Augusto R, Roquis D, Al Picard M, Chaparro C, Cosseau C, Grunau C (2020) Measuring histone modifications in the human parasite Schistosoma mansoniMethods in Molecular Biology 2151: 93-107. [Plateforme Epigénomique]

Derolez V, Malet N, Fiandrino A, Lagarde F, Richard M, Ouisse V, Bec B, Aliaume C (2020) Fifty years of ecological changes: Regime shifts and drivers in a coastal  Mediterranean lagoon during oligotrophication. Science of The Total Environment 732: 139292. [Plateforme Microbex]

Desriac F, El Harras A, Simon M, Bondon A, Brillet B, Le Chevalier P, Pugnière M, Got P, Destoumieux-Garzón D, Fleury Y (2020) Alterins produced by oyster-associated Pseudoalteromonas are antibacterial cyclolipopeptides with LPS-binding activity. Marine Drugs 18 (12): 630. [Plateforme Microbex]

Dormont L, Fort T, Bessière J-M, Proffit M, Garcia Hidalgo E, Buatois B, Schatz B (2020) Sources of floral scent variation in the food-deceptive orchid Orchis mascula. Acta Oecologica 107: 103600. [Plateforme PACE]

Draredja MA, Frihi H, Boualleg C, Abadie E, Laabir M (2020) Distribution of dinoflagellate cyst assemblages in recent sediments from a southern Mediterranean lagoon (Mellah, Algeria) with emphasis on toxic species. Environmental Science and Pollution Research 27 (20): 25173-25185. [Plateforme Microbex]

Dugé de Bernonville T, Maury Sp, Delaunay A, Daviaud C, Chaparro C, Tost Jr, O‚ÄôConnor SE, Courdavault V (2020) Developmental Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation. International Journal of Molecular Sciences 21 (17): 6028. [Plateforme Epigénomique]

El Adouzi M, Arriaga-Jiménez A, Dormont L, Barthes N, Labalette A, Lapeyre Bt, Bonato O, Roy L (2020) Modulation of feed composition is able to make hens less attractive to the poultry red mite Dermanyssus gallinae. Parasitology 147 (2): 171-181. [Plateforme PACE]

Evin A, Lebrun R, Durocher M, Ameen C, Larson G, Sykes N (2020) Building three- dimensional models before destructive sampling of bioarchaeological remains: A comment to Pálsdóttir et al. (2019). Royal Society Open Science 7: [Plateforme Microtomographie RX]

Ferreira MS, Alves PC, Callahan CM, Giska I, Farelo L, Jenny H, Mills LS, Hackländer K, Good JM, Melo‐Ferreira J (2020) Transcriptomic regulation of seasonal coat color change in hares. Ecology and Evolution 10 (3): 1180-1192. [Plateforme MBB]

Ferreira-Cardoso S, Billet G, Gaubert P, Delsuc F, Hautier L (2020a) Skull shape variation in extant pangolins (Pholidota: Manidae): allometric patterns and  systematic implications. Zoological Journal of the Linnean Society 188 (1): 255-275. [Plateforme Microtomographie RX]

Ferreira-Cardoso S, Fabre P-H, de Thoisy B, Delsuc F, Hautier L (2020b) 3D models related to the publication: "Comparative masticatory myology in anteaters and its implications for interpreting morphological convergence in myrmecophagous placentals". MorphoMuseuM 6: e114. [Plateforme Microtomographie RX]

Ferreira-Cardoso S, Fabre PH, de Thoisy B, Delsuc F, Hautier L (2020c) Comparative masticatory myology in anteaters and its implications for interpreting morphological convergence in myrmecophagous placentals. PeerJ 8: e9690. [Plateforme Microtomographie RX]

Fietz K, Trofimenko E, Guerin P-E, Arnal V, Torres-Oliva M, Lobréaux S, Pérez-Ruzafa A, Manel S, Puebla O (2020) New genomic resources for three exploited Mediterranean fishes. Genomics 112 (6): 4297-4303. [Plateforme MBB]

Fort F, Freschet GT (2020) Plant ecological indicator values as predictors of fine-root trait variations. Journal of Ecology 108: 1565-1577. [Plateforme TE]

Fromin N, Shihan A, Santonja M, Baldy V, Hättenschwiler S (2020) Soil microbial activity in a Mediterranean garrigue responds more to changing shrub community than to  reduced rainfall. Plant and Soil 449: 405-421. [Plateforme TE & Plateforme PACE]

Galès A, Triplet S, Geoffroy T, Roques C, Carré C, Le Floc’h E, Lanfranchi M, Simier M, Roque d’Orbcastel E, Przybyla C, Fouilland E (2020) Control of the pH for marine microalgae polycultures: A key point for CO2 fixation improvement in intensive cultures. Journal of CO2 Utilization 38: 187-193. [Plateforme Microbex]

Gamble A, Garnier R, Chambert T, Gimenez O, Boulinier T (2020) Next-generation serology: integrating cross-sectional and capture-recapture approaches to infer disease  dynamics. Ecology 101 (2): e02923. [Post-doctorat Cemeb]

Ganem G, Dufour CMS, Avenant NL, Caminade P, Eiseb SJ, Tougard C, Pillay N (2020) An update on the distribution and diversification of Rhabdomys sp. (Muridae, Rodentia). Journal of Vertebrate Biology 69 (2): 20013.1-17. [Projet exploratoire Cemeb & Plateforme GenSeq & Plateforme MBB]

García de Jalón L, Limousin J-M, Richard F, Gessler A, Peter M, Hättenschwiler S, Milcu A (2020) Microhabitat and ectomycorrhizal effects on the establishment, growth and survival of Quercus ilex L. seedlings under drought. Plos One 15 (6): e0229807. [Plateforme TE]

Gavinet J, Ourcival JM, Gauzere J, García de Jalón L, Limousin JM (2020) Drought mitigation by thinning: Benefits from the stem to the stand along 15 years of experimental rainfall exclusion in a holm oak coppice. Forest Ecology and Management 473: 118266. [Plateforme TE]

Gazaix A, Klesczewski M, Bouchet MA, Cartereau M, Molina J, Michaud H, Muller SD, Pirsoul L, Gauthier P, Grillas P, Thompson JD (2020a) A history of discoveries and disappearances of the rare annual plant Lythrum thesioides M.Bieb.: new insights into its ecology and biology. Botany Letters 167: 201-211. [Plateforme TE]

Gazaix A, Mazarc S, Veredd S (2020b) Lythrum netofa (Lythraceae) a new species from a temporary flooded plain of Israel. Phytotaxa 437: 47-50. [Plateforme TE]

Gil-Fernández A, Saunders PA, Martín-Ruiz M, Ribagorda M, López-Jiménez P, Jeffries DL, Parra MT, Viera A, Rufas JS, Perrin N, Veyrunes F, Page J (2020) Meiosis reveals the early steps in the evolution of a neo-XY sex chromosome pair in the African pygmy mouse Mus minutoides. PLOS Genetics 16 (11): e1008959. [Plateforme Cytogénomique]

Gillespie LM, Fromin N, Milcu A, Buatois B, Pontoizeau C, Hättenschwiler S (2020) Higher tree diversity increases soil microbial resistance to drought. Communications Biology  3 (1): 377. [Plateforme PACE]

Gomes Rodrigues H, Tabuce R, Asher RJ, Hautier L (2020) Developmental origins and homologies of the hyracoid dentition. Evolution & Development 22: 323-335. [Plateforme Microtomographie RX]

Hadjadji I, Laabir M, Frihi H, Collos Y, Shao ZJ, Berrebi P, Abadie E, Amzil Z, Chomérat N, Rolland JL, Rieuvilleneuve F, Masseret E (2020) Unsuspected intraspecific variability in the toxin production, growth and morphology of the dinoflagellate Alexandrium pacificum R.W. Litaker (Group IV) blooming in a South Western Mediterranean marine ecosystem, Annaba Bay (Algeria). Toxicon 180: 79-88. [Plateforme Microbex]

Imai Y, Biot M, Clément JAJ, Teragaki M, Urbach S, Robert T, Baudat F, Grey C, de Massy B (2020) PRDM9 activity depends on HELLS and promotes local 5- hydroxymethylcytosine enrichment. eLife 9: e57117. [Plateforme Epigénomique]

Jaonalison H, Durand JD, Mahafina J, Demarcq H, Lagarde R, Ponton D (2020) Spatial and interannual variability of presettlement tropical fish assemblages explained by remote sensing oceanic conditions. Marine Biodiversity 50 (4): 52. [Plateforme GenSeq]

Joffard N, Arnal V, Buatois B, Schatz B, Montgelard C, Dafni A (2020a) Floral scent evolution in the section Pseudophrys: pollinator‐mediated selection or phylogenetic constraints? Plant Biology 22 (5): 881-889. [Plateforme PACE]

Joffard N, Le Roncé I, Langlois A, Renoult J, Buatois B, Dormont L, Schatz B (2020b) Floral trait differentiation in Anacamptis coriophora: phenotypic selection on scents, but not on colour. Journal of Evolutionary Biology 33: 1028-1038. [Plateforme TE & Plateforme PACE]

Joly F-X, Coq S, Coulis M, David J-F, Hättenschwiler S, Mueller CW, Prater I, Subke J-A (2020) Detritivore conversion of litter into faeces accelerates organic matter turnover. Communications Biology 3 (1): 660. [Plateforme TE & Plateforme PACE]

Jourdain E, Karoliussen R, de Vos J, Zakharov SE, Tougard C (2020) Killer whales (Orcinus orca) feeding on lumpfish (Cyclopterus lumpus) in northern Norway. Marine Mammal Science 36 (1): 89-102. [Plateforme GenSeq]

Kokolo B, Attéké Nkoulémbéné C, Ibrahim B, M'Batchi B, Blatrix R (2020) Phenotypic plasticity in size of ant-domatia. Scientific Reports 10: 20948. [Plateforme TE]

Laroche L, Ravel S, Baldet T, Lancelot R, Chandre F, Rossignol M, Le Goff V, Duhayon M, Fafet JF, Parker AG, Bouyer J (2020) Boosting the sterile insect technique with pyriproxyfen increases tsetse flies Glossina palpalis gambiensis sterilization in controlled conditions. Scientific Reports 10 (1): 9947. [Vectopole]

Le Roncé I, Toïgo M, Dardevet E, Venner S, Limousin J-M, Chuine I (2020) Resource manipulation through experimental defoliation has legacy effects on allocation to reproductive and vegetative organs in Quercus ilex. Annals of Botany 126 (7): 1165- 1179. [Projet Equipe de Recherche Junior Cemeb & Plateforme TE & Plateforme PACE]

Le Verger K, Hautier L, Bardin J, Gerber S, Delsuc F, Billet G (2020) Ontogenetic and static allometry in the skull and cranial units of nine-banded armadillos (Cingulata: Dasypodidae: Dasypus novemcinctus). Biological Journal of the Linnean Society 131: 673-698. [Plateforme Microtomographie RX]

Lenormand T, Fyon F, Sun E, Roze D (2020) Sex chromosome degeneration by regulatory evolution. Current Biology 30: 3001-3006. [Plateforme MBB]

Madrieres S, Tatard C, Murri S, Vulin J, Galan M, Piry S, Pulido C, Loiseau A, Artige E, Benoit L, Lemenager N, Lakhdar L, Charbonnel N, Marianneau P, Castel G (2020) How bank vole-PUUV interactions influence the eco-evolutionary processes driving Nephropathia Epidemica epidemiology - an experimental and genomic approach. Pathogens 9 (10): 789. [Plateforme GenSeq]

Mahaut L, Fort F, Violle C, Freschet GT (2020) Multiple facets of diversity effects on plant productivity: species richness, functional diversity, species identity and intraspecific competition. Functional Ecology 34 (1): 287–298. [Plateforme PACE]

Mallil K, Justy F, Rueness EK, Dufour S, Totis T, Bloch C, Baarman J, Amroun M, Gaubert  P (2020) Population genetics of the African wolf (Canis lupaster) across its range:  first evidence of hybridization with domestic dogs in Africa. Mammalian Biology 100 (6): 645-658. [Plateforme ADN dégradé & Plateforme GenSeq]

Manel S, Guerin P-E, Mouillot D, Blanchet S, Velez L, Albouy C, Pellissier L (2020) Global determinants of freshwater and marine fish genetic diversity. Nature Communications 11 (1): 692. [Plateforme MBB]

Marivaux L, Aguirre-Diaz W, Benites-Palomino A, Billet G, Boivin M, Pujos F, Salas- Gismondi R, Tejada-Lara JV, Varas-Malca RM, Antoine PO (2020a) New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia. Journal of Human Evolution 146: 102835. [Plateforme Microtomographie RX]

Marivaux L, Salas-Gismondi R, Antoine P-O (2020b) 3D models related to the publication: New record of Neosaimiri (Cebidae, Platyrrhini) from the late Middle Miocene of Peruvian Amazonia. MorphoMuseuM 6: e119. [Plateforme Microtomographie RX]

Marivaux L, Velez-Juarbe J, Antoine P-O (2020c) 3D models related to the publication: Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies. MorphoMuseuM 6: e127. [Plateforme Microtomographie RX]

Marivaux L, Vélez-Juarbe J, Merzeraud G, Pujos F, Viñola López LW, Boivin M, Santos- Mercado H, Cruz EJ, Grajales A, Padilla J, Vélez-Rosado KI, Philippon M, Léticée  JL, Münch P, Antoine PO (2020d) Early Oligocene chinchilloid caviomorphs from Puerto Rico and the initial rodent colonization of the West Indies. Proceedings of the Royal Society B: Biological Sciences 287 (1920): 20192806. [Plateforme Microtomographie RX]

Marques JP, Seixas FA, Farelo L, Callahan CM, Good JM, Montgomery WI, Reid N, Alves PC, Boursot P, Melo-Ferreira J (2020a) An annotated draft genome of the mountain hare (Lepus timidus). Genome Biology and Evolution 12 (1): 3656-3662. [Plateforme MBB]

Marques R, Bonnet D, Carré C, Roques C, Darnaude AM (2020b) Trophic ecology of a blooming jellyfish (Aurelia coerulea) in a Mediterranean coastal lagoon. Limnology and Oceanography 66 (1): 141-157. [Plateforme Microbex]

Martin J-L, Chamaillé S, Waller DM (2020) Deer, wolves, and human society:  Costs, benefits, and challenges in living together. Biological Reviews 95 (3): 782-801. [Chercheur invité CeMEB]

Martinez Q, Clavel J, Esselstyn JA, Achmadi AS, Grohé C, Pirot N, Fabre PH (2020) Convergent evolution of olfactory and thermoregulatory capacities in small amphibious mammals. Proceedings of the National Academy of Sciences, USA 117: 8958-8965. [Plateforme Microtomographie RX]

Merino-Martín L, Griffiths RI, Gweon HS, Furget-Bretagnon C, Oliver A, Mao Z, Le Bissonnais Y, Stokes A (2020) Rhizosphere bacteria are more strongly related to plant root traits than fungi in temperate montane forests: insights from closed and open forest patches along an elevational gradient. Plant and Soil 450: 183-200. [Plateforme TE]

Miralles A, Geniez P, Beddek M, Aranda DM, Brito JC, Leblois R, Crochet P-A (2020) Morphology and multilocus phylogeny of the spiny-footed lizard (Acanthodactylus erythrurus) complex reveal two new mountain species from the Moroccan Atlas. Zootaxa 4747 (2): 302-326. [Projet exploratoire Cemeb]

Moreaux V, Longdoz B, Berveiller D, Delpierre N, Dufrêne E, Bonnefond J-M, Chipeaux C, Joffre R, Limousin J-M, Ourcival J-M, Klumpp K, Darsonville O, Brut A, Tallec T, Ceschia E, Panthou G, Loustau D (2020) Environmental control of land-atmosphere CO2 fluxes from temperate ecosystems: a statistical approach based on homogenized time series from five land-use types. Tellus B: Chemical and Physical Meteorology 72 (1): 1-25. [Plateforme TE]

Murri S, Madrières S, Tatard C, Piry S, Benoit L, Loiseau A, Pradel J, Artige E, Audiot P, Leménager N, Lacôte S, Vulin J, Charbonnel N, Marianneau P, Castel G (2020) Detection and genetic characterization of Puumala Orthohantavirus S-Segment in areas of France non-endemic for nephropathia epidemica. Pathogens 9 (9): 721.  [Projet exploratoire Cemeb]

North HL, Caminade P, Severac D, Belkhir K, Smadja CM (2020) The role of copy-number variation in the reinforcement of sexual isolation between the two European  subspecies of the house mouse. Philosophical Transactions of the Royal Society B: Biological Sciences 375 (1806): 20190540. [Plateforme MBB]

Nurhayu W, Nila S, Widayati KA, Rianti P, Suryobroto B, Raymond M (2020) Handedness heritability in industrialized and nonindustrialized societies. Heredity 124 (2): 313-324. [Plateforme MBB]

Oelze VM, Percher AM, Nsi Akoué G, El Ksabi N, Willaume E, Charpentier MJE (2020) Seasonality and interindividual variation in mandrill feeding ecology revealed by stable isotope analyses of hair and blood. American Journal of Primatology 82 (12): e23206. [Plateforme PACE]

Orliac MJ, Orliac C, Orliac MC, Hautin A (2020) A delphinid petrosal bone from a gravesite on Ahu Tahai, Easter Island: taxonomic attribution, external and internal morphology. MorphoMuseuM 6: e91. [Plateforme Microtomographie RX]

Paradis E (2020) Modelling transition in land cover highlights forest losses and gains in Southeast Asia. Biodiversity and Conservation 29 (8): 2539-2551. [Plateforme MBB]

Paschalis A, Fatichi S, Zscheischler J, Ciais P, Bahn M, Boysen L, Chang JF, De Kauwe M, Estiarte M, Goll D, Hanson PJ, Harper AB, Hou EQ, Kigel J, Knapp AK, Larsen KS, Li W, Lienert S, Luo YQ, Meir P, Nabel J, Ogaya R, Parolari AJ, Peng CH, Penuelas J, Pongratz J, Rambal S, Schmidt IK, Shi H, Sternberg M, Tian HQ, Tschumi E, Ukkola A, Vicca S, Viovy N, Wang YP, Wang ZN, Williams K, Wu DH, Zhu QA (2020) Rainfall manipulation experiments as simulated by terrestrial biosphere  models: Where do we stand? Global Change Biology 26: 3336-3355.

Perrin A, Gosselin-Grenet A-S, Rossignol M, Ginibre C, Scheid B, Lagneau C, Chandre F, Baldet T, Ogliastro M, Bouyer J (2020) Variation in the susceptibility of urban Aedes mosquitoes infected with a densovirus. Scientific Reports 10 (1): 18654. [Vectopole]

Pringault O, Bouvy M, Carre C, Fouilland E, Meddeb M, Mejri K, Leboulanger C, Sakka Hlaili A (2020) Impacts of chemical contamination on bacterio-phytoplankton coupling. Chemosphere 257: 127165. [Plateforme Microbex]

Proffit M, Lapeyre B, Buatois B, Deng XX, Arnal P, Gouzerh F, Carrasco D, Hossaert- McKey M (2020) Chemical signal is in the blend: bases of plant-pollinator encounter in a highly specialized interaction. Scientific Reports 10: 10071. [Plateforme PACE]

Quéméré E, Rossi S, Petit E, Marchand P, Merlet J, Game Y, Galan M, Gilot-Fromont E (2020) Genetic epidemiology of the Alpine ibex reservoir of persistent and virulent brucellosis outbreak. Scientific Reports 10 (1): 4400. [Plateforme GenSeq]

Ranoarisoa MP, Trap J, Pablo A-L, Dezette D, Plassard C (2020) Micro-food web  interactions involving bacteria, nematodes, and mycorrhiza enhance tree P nutrition in a high P-sorbing soil amended with phytate. Soil Biology and Biochemistry 143: 107728. [Plateforme EcoTrop]

Rataud A, Dupraz M, Toty C, Blanchon T, Vittecoq M, Choquet R, McCoy KD (2020) Evaluating functional dispersal in a nest ectoparasite and its eco-epidemiological implications. Frontiers in Veterinary Science 7: 570157. [Projet exploratoire Cemeb]

Rescan M, Grulois D, Ortega-Aboud E, Chevin L-M (2020) Phenotypic memory drives population growth and extinction risk in a noisy environment. Nature Ecology & Evolution 4: 193–201. [Plateforme GenSeq]

Rode NO, Courtier-Orgogozo V, Débarre F (2020) Can a population targeted by a CRISPR- based homing gene drive be rescued? G3: Genes Genomes Genetics 10 (9): 3403- 3415. [Post-doctorat Cemeb]

Rodrigues L, Sprafke T, Bokatola Moyikola C, Barthès BG, Bertrand I, Comptour M, Rostain S, Yoka J, McKey D (2020) A Congo Basin ethnographic analogue of pre-Columbian Amazonian raised fields shows the ephemeral legacy of organic matter management. Scientific Reports 10 (1): 10851 [Projet exploratoire Cemeb & Plateforme EcoTrop]

Roques C, Grousset E, Troussellier M, Hermet S, Le Carrer J, Sar C, Caro A (2020) A trade- off between mucocytes and bacteriocytes in Loripes orbiculatus gills (Bivalvia, Lucinidae): a mixotrophic adaptation to seasonality and reproductive status in a symbiotic species? Marine Biology 167 (10):  [Plateforme Microbex]

Rossi LMW, Mao Z, Merino-Martín L, Roumet C, Fort F, Taugourdeau O, Boukcim H, Fourtier S, Del Rey-Granado M, Chevallier T, Cardinael R, Fromin N, Stokes A (2020) Pathways to persistence: plant root traits alter carbon accumulation in different soil carbon pools. Plant and Soil 452 (1-2): 457-478. [Plateforme PACE]

Roy L, Taudière A, Papaïx J, Blatrix R, Chiron G, Zriki G, Bonato O, Barnagaud JY (2020) Evaluating the link between predation and pest control services in the mite world. Ecology and Evolution 10 (18): 9968-9980. [Doctorat Cemeb & Plateforme PACE & Plateforme TE]

Salomón RL, Steppe K, Ourcival J-M, Villers S, Rodríguez-Calcerrada J, Schapman R, Limousin J-M (2020) Hydraulic acclimation in a Mediterranean oak subjected to permanent throughfall exclusion results in increased stem hydraulic capacitance.  Plant, Cell and Environment 43: 1528-1544. [Plateforme TE]

Sauvadet M, Saj S, Freschet GT, Essobo JD, Enock S, Becquer T, Tixier P, Harmand JM, Magrach A (2020) Cocoa agroforest multifunctionality and soil fertility explained by shade tree litter traits. Journal of Applied Ecology 57 (3): 476-487. [Plateforme EcoTrop]

Segrestin J, Navas M-L, Garnier E (2020) Reproductive phenology as a dimension of the phenotypic space in 139 plant species from the Mediterranean. New Phytologist 225: 740-753. [Plateforme TE]

Shihan A, Volaire F, Hättenschwiler S (2020) Neighbor identity affects growth and survival of Mediterranean plants under recurrent drought. Oecologia 194: 555-569.  [Plateforme TE]

Sholihah A, Delrieu-Trottin E, Sukmono T, Dahruddin H, Risdawati R, Elvyra R, Wibowo A, Kustiati K, Busson F, Sauri S, Nurhaman U, Dounias E, Zein MSA, Fitriana Y, Utama IV, Muchlisin ZA, Agnèse J-F, Hanner R, Wowor D, Steinke D, Keith P, Rüber L, Hubert N (2020) Disentangling the taxonomy of the subfamily Rasborinae (Cypriniformes, Danionidae) in Sundaland using DNA barcodes. Scientific Reports 10 (1): 2818. [Plateforme GenSeq]

Simon A, Arbiol C, Nielsen EE, Couteau J, Sussarellu R, Burgeot T, Bernard I, Coolen JWP, Lamy J-B, Robert S, Skazina M, Strelkov P, Queiroga H, Cancio I, Welch JJ, Viard F, Bierne N (2020) Replicated anthropogenic hybridisations reveal parallel patterns of admixture in marine mussels. Evolutionary Applications 13 (3): 575–599. [Plateforme GenSeq & Plateforme MBB]

Souquet L, Corradini C, Girard C (2020a) 3D models related to the publication: Siphonodella leiosa (Conodonta), a new unornamented species from the Tournaisian (lower Carboniferous) of Puech de la Suque (Montagne Noire, France). MorphoMuseuM 6 (3): e115. [Projet exploratoire Cemeb]

Souquet L, Corradini C, Girard C (2020b) Siphonodella leiosa (Conodonta), a new unornamented species from the Tournaisian (lower Carboniferous) of Puech de la Suque (Montagne Noire, France). Geobios 61: 55-60. [Projet exploratoire Cemeb]

Sow A, Haran J, Benoit L, Galan M, Brevault T (2020a) DNA metabarcoding as a tool for disentangling food webs in agroecosystems. Insects 11 (5): 294. [Plateforme GenSeq]

Sow A, Seye D, Faye E, Benoit L, Galan M, Haran J, Brevault T (2020b) Birds and bats contribute to natural regulation of the millet head miner in tree-crop agroforestry systems. Crop Protection 132: 105127. [Plateforme GenSeq]

Stojanova B, Maurice S, Cheptou P-O (2020) Season-dependent effect of cleistogamy in Lamium amplexicaule: flower type origin versus inbreeding status. American Journal of Botany 107 (1): 155-163. [Plateforme TE]

Thoumazeau A, Chevallier T, Baron V, Rakotondrazafy N, Panklang P, Marichal R, Kibblewhite M, Sebag D, Tivet F, Bessou C, Gay F, Brauman A (2020) A new in- field indicator to assess the impact of land management on soil carbon dynamics. Geoderma 375: 114496. [Projet Equipe de Recherche Junior Cemeb & Plateforme PACE & Plateforme EcoTrop]

Tournayre O, Leuchtmann M, Filippi-Codaccioni O, Trillat M, Piry S, Pontier D, Charbonnel N, Galan M (2020) In silico and empirical evaluation of twelve metabarcoding primer sets for insectivorous diet analyses. Ecology and Evolution 10 (13): 6310-6332. [Doctorat Cemeb & Projet Equipe de Recherche Junior Cemeb & Plateforme GenSeq]

Trombetta T, Vidussi F, Roques C, Scotti M, Mostajir B (2020) Marine microbial food web networks during phytoplankton bloom and non-bloom periods: warming favors  smaller organism interactions and intensifies trophic cascade. Frontiers in Microbiology 11: 502336. [Plateforme Microbex]

Vaissière A-C, Calvet C, Quétier F, Latune J (2020a) Quelles implications possibles du  monde agricole dans la compensation écologique ? Vers des approches territoriales. Sciences, Eaux & Territoires 31: 38-43. [Post-doctorat Cemeb]

Vaissière A-C, Quétier F, Calvet C, Levrel H, Wunder S (2020b) Biodiversity offsets and payments for environmental services: clarifying the family ties. Ecological Economics 169: 106428. [Post-doctorat Cemeb]

Van der Geest M, Van der Heide T, Holmer M, DeWit R (2020) First field-based evidence that the seagrass-lucinid mutualism can mitigate sulfide stress in seagrasses. Frontiers in Marine Science 7: 11. [Post-doctorat Cemeb]

Vandeputte M, Clota F, Sadoul B, Blanc M-O, Blondeau-Bidet E, Bégout M-L, Cousin X, Geffroy B (2020) Low temperature has opposite effects on sex determination in a marine fish at the larval/postlarval and juvenile stages. Ecology and Evolution 10 (24): 13825-13835. [Plateforme GenSeq]

Vautrin Q, Lihoreau F, Sambou B, Thiam M, Martin JE, Tabuce R, Adnet S, Lebrun R, Charruault A-L, Sarr R, Hautier L (2020) From limb to fin: an Eocene protocetid forelimb from Senegal sheds new light on the early locomotor evolution of cetaceans. Palaeontology 63:  [Plateforme Microtomographie RX]

Vezy R, le Maire G, Christina M, Georgiou S, Imbach P, Hidalgo HG, Alfaro EJ, Blitz- Frayret C, Charbonnier F, Lehner P, Loustau D, Roupsard O (2020) DynACof: A process-based model to study growth, yield and ecosystem services of coffee agroforestry systems. Environmental Modelling & Software 124: 104609. [Plateforme MBB]

Villette P, Afonso E, Couval G, Levret A, Galan M, Goydadin AC, Cosson JF, Giraudoux P (2020) Spatio-temporal trends in richness and persistence of bacterial communities in decline-phase water vole populations. Scientific Reports 10 (1): 9506. [Plateforme GenSeq]

Vogt-Schilb H, Tesitelova T, Kotilinek M, Suchacek P, Kohout P, Jersakova J (2020) Altered rhizoctonia assemblages in grasslands on ex-arable land support germination of mycorrhizal generalist, not specialist orchids. New Phytologist 227: 1200-1212. [Plateforme TE]

Volaire F, Morvan-Bertrand A, Prud’homme M-P, Benot M-L, Augusti A, Zwicke M, Roy J, Landais D, Picon-Cochard C (2020) The resilience of perennial grasses under two climate scenarios is correlated with carbohydrate metabolism in meristems. Journal of Experimental Botany 71 (1): 370-385. [Plateforme TE]

Weemstra M, Freschet GT, Stokes A, Roumet C (2020) Patterns in intraspecific variation in root traits are species-specific along an elevation gradient. Functional Ecology 35: 342-356. [Plateforme PACE]

Williams HJ, Taylor LA, Benhamou S, Bijleveld AI, Clay TA, de Grissac S, Demsar U, English HM, Franconi N, Gómez-Laich A, Griffiths RC, Kay WP, Morales JM, Potts JR, Rogerson KF, Rutz C, Spelt A, Trevail AM, Wilson RP, Börger L (2020) Optimizing the use of bio-loggers for movement ecology research. Journal of Animal Ecology 89: 186-206. [Plateforme TE]

Zhou S, Butenschoen O, Barantal S, Handa IT, Makkonen M, Vos V, Aerts R, Berg MP, McKie B, Van Ruijven J, Hättenschwiler S, Scheu S (2020) Decomposition of leaf litter mixtures across biomes: the role of litter identity, diversity and soil fauna. Journal of Ecology 108: 2283–2297. [Plateforme TE]

Zriki G, Blatrix R, Roy L (2020) Predation interactions among henhouse‐dwelling arthropods, with a focus on the poultry red mite Dermanyssus gallinae. Pest Management Science 76 (11): 3711-3719. [Doctorat Cemeb & Plateforme PACE & Plateforme TE]

Informations complémentaires: 
Publications 2019 issues des financements CEMEB

Explotary projects, ERJ, doctoral and post-doct, labeled platforms and invited scientists

Altinli M, Lequime S, Courcelle M, Francois S, Justy F, Gosselin-Grenet AS, Ogliastro M, Weill M, Sicard M (2019a) Evolution and phylogeography of Culex pipiens densovirus. Virus Evolution 5 (2): vez053. [Plateforme GenSeq]

Altinli M, Soms J, Ravallec M, Justy F, Bonneau M, Weill M, Gosselin-Grenet AS, Sicard M (2019b) Sharing cells with Wolbachia: the transovarian vertical transmission of Culex pipiens densovirus. Environmental Microbiology 21 (9): 3284-3298. [Plateforme q-PCR haut débit]

Augusto RdC, Cosseau C, Grunau C (2019) Histone methylome of the human parasite Schistosoma mansoni In: Jurga S, Barciszewski J (eds) The DNA, RNA, and Histone Methylomes. Springer International Publishing, Cham, pp 607-624. [Plateforme Epigénomique]

Aumeeruddy-Thomas Y, Hmimsa Y (2019) Fig and olive domestication in the Rif, northern Morocco: entangled human and tree lives and history. In: Stépanoff C, Vigne J-D (eds) Hybrid communities: biosocial approaches to domestication and other trans-species relationships. Routledge, Abingdon, UK, pp 179-196. [Plateforme TE]

Aupic-Samain A, Baldy V, Lecareux C, Fernandez C, Santonja M (2019) Tree litter identity and predator density control prey and predator demographic parameters in a Mediterranean litter-based multi-trophic system. Pedobiologia 73: 1–9. [Plateforme PACE]

Baudat F, de Massy B, Veyrunes F (2019) Sex chromosome quadrivalents in oocytes of the African pygmy mouse Mus minutoides that harbors non-conventional sex chromosomes. Chromosoma 128 (3): 397-411. [Plateforme Cytogénomique]

Binetruy F, Dupraz M, Buysse M, Duron O (2019) Surface sterilization methods impact measures of internal microbial diversity in ticks. Parasites & Vectors 12 (1): 268. [Plateforme GenSeq]

Blondeau-Bidet E, Hiroi J, Lorin-Nebel C (2019) Ion uptake pathways in European sea bass Dicentrarchus labrax. Gene 692: 126-137. [Plateforme q-PCR haut débit]

Bonneau M, Caputo B, Ligier A, Caparros R, Unal S, Perriat-Sanguinet M, Arnoldi D, Sicard M, Weill M (2019) Variation in Wolbachia cidB gene, but not cidA, is associated with cytoplasmic incompatibility mod phenotype diversity in Culex pipiens. Molecular Ecology 28 (21): 4725-4736. [Plateforme GenSeq]

Bourgarel M, Noël V, Pfukenyi D, Michaux J, André A, Becquart P, Cerqueira F, Barrachina C, Boué V, Talignani L, Matope G, Missé D, Morand S, Liégeois F (2019) Next-generation sequencing on insectivorous bat guano: an accurate tool to identify arthropod viruses of potential agricultural concern. Viruses 11 (12): 1102. [Plateforme GenSeq & Projet exploratoire Cemeb]

Bourgeois B, Munoz F, Fried G, Mahaut L, Armengot L, Denelle P, Storkey J, Gaba S, Violle C (2019) What makes a weed a weed? A large-scale evaluation of arable weeds through a functional lens. American Journal of Botany 106: 90-100. [Plateforme TE]

Bristiel P, Roumet C, Violle C, Volaire F, 434: (2019) Coping with drought: root trait variability within the perennial grass Dactylis glomerata captures a trade-off between dehydration avoidance and dehydration tolerance. Plant and Soil 434: 327-342. [Plateforme TE & Plateforme PACE]

Buysse M, Plantard O, McCoy KD, Duron O, Menard C (2019) Tissue localization of Coxiella-like endosymbionts in three European tick species through fluorescence in situ hybridization. Ticks and Tick Borne Diseases 10 (4): 798-804. [Projet exploratoire Cemeb]

Bykova O, Chuine I, Morin X (2019) Highlighting the importance of water availability in reproductive processes to understand climate change impacts on plant biodiversity. Perspectives in Plant Ecology, Evolution and Systematics 37: 20-25. [Post-doctorat Cemeb]

Calvet C, Le Coënt P, Quétier F, Napoleone C (2019) Challenges of achieving biodiversity offsetting through agri-environmental schemes: evidence from an empirical study. Ecological Economics 163: 113-125. [Post-doctorat Cemeb]

Calvet C, Salles JM (2019) Entre intégrité écologique et efficacité économique: analyse d’une politique d’absence de perte nette écologique. Revue juridique de l'environnement 44 (3): 517-529. [Post-doctorat Cemeb]

Calvez V, Gabriel P, González ÁM (2019) Limiting Hamilton-Jacobi equation for the large scale asymptotics of a subdiffusion jump-renewal equation. Asymptotic Analysis 115 (1-2): 63-94. [Post-doctorat Cemeb]

Caro SP, Cornil CA, van Oers K, Visser ME (2019) Personality and gonadal development as sources of individual variation in response to GnRH challenge in female great tits. Proceedings of the Royal Society B, Biological Sciences 286 (1902): 20190142. [Plateforme TE]

Castel G, Chevenet F, Razzauti M, Murri S, Marianneau P, Cosson JF, Tordo N, Plyusnin A (2019) Phylogeography of Puumala orthohantavirus in Europe. Viruses 11 (8): 679. [Projet exploratoire Cemeb]

Chao L, Liu YY, Freschet GT, Zhang WD, Yu X, Zheng WH, Guan X, Yang QP, Chen LC, Dijkstra FA, Wang SL (2019) Litter carbon and nutrient chemistry control the magnitude of soil priming effect. Functional Ecology 33: 876-888. [Plateforme TE]

Charbonnel N, Galan M, Tatard C, Loiseau A, Diagne CA, Dalecky A, Parrinello H, Rialle S, Severac D, Brouat C (2019) Differential immune gene expression associated with contemporary range expansion of two invasive rodents in Senegal. PCI Ecology bioRxiv 442160, ver 4: peer-reviewed and recommended by PCI Ecology. [Plateforme GenSeq]

Chevenet F, Castel G, Jousselin E, Gascuel O (2019) PastView: a user-friendly interface to explore ancestral scenarios. BMC Evolutionary Biology 19 (1): 163. [Projet exploratoire Cemeb]

Clergeot PH, Rode NO, Glemin S, Brandstrom-Durling M, Ihrmark K, Olson A (2019) Estimating the fitness effect of deleterious mutations during the two phases of the life cycle: A new method applied to the root-rot fungus Heterobasidion parviporum. Genetics 211 (3): 963-976. [Post-doctorat Cemeb]

Corse E, Tougard C, Archambaud-Suard G, Agnese JF, Messu Mandeng FD, Bilong Bilong CF, Duneau D, Zinger L, Chappaz R, Xu CCY, Meglecz E, Dubut V (2019) One-locus-several-primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies. Ecology and Evolution 9 (8): 4603-4620. [Plateforme ADN dégradé]

Cortés D, C. de Gracia, Carrillo-Briceño JD, Aguirre-Fernandez G, Jaramillo C, Benites-Palomino A, Atencio-Arauz JE (2019) Shark-cetacean trophic interactions during the late Pliocene in the Central Eastern Pacific (Panama). Paleontologia Electronica 22 (2): 49A. [Chercheur invité CeMEB]

Courcelle M, Tilak MK, Leite YLR, Douzery EJP, Fabre PH (2019) Digging for the spiny rat and hutia phylogeny using a gene capture approach, with the description of a new mammal subfamily. Molecular Phylogenetics and Evolution 136: 241-253. [Plateforme MBB]

Debiais-Thibaud M, Simion P, Venteo S, Munoz D, Marcellini S, Mazan S, Haitina T (2019) Skeletal mineralization in association with type X collagen expression is an ancestral feature for jawed vertebrates. Molecular Biology and Evolution 36 (10): 2265-2276. [Plateforme MBB]

Decombeix A-L, Galtier J, McLoughlin S, Meyer-Berthaud B, Webb GE, Blake PR (2019) Early Carboniferous lignophyte tree diversity in Australia: Woods from the Drummond and Yarrol basins, Queensland. Review of Palaeobotany and Palynology 263: 47-64. [Projet exploratoire Cemeb]

Desoutter A, Yusuf Solieman O, Subsol G, Fages M, Cuisinier F (2019) Method to approximate intra oral scanner noise and resolution. Lasers in Dentistry XXV, vol 10857. SPIE. doi:10.1117/12.2509460

Dubart M, Pantel JH, Pointier JP, Jarne P, David P (2019) Modeling competition, niche, and coexistence between an invasive and a native species in a two-species metapopulation. Ecology 100 (6): e02700. [Plateforme MBB]

Dukic M, Berner D, Haag CR, Ebert D (2019) How clonal are clones? A quest for loss of heterozygosity during asexual reproduction in Daphnia magna. Journal of Evolutionary Biology 32: 619-628. [Plateforme TE]

Errouissi F, Jay-Robert P (2019) Consequences of habitat change in euromediterranean landscapes on the composition and diversity of dung beetle assemblages (Coleoptera, Scarabaeoidea). Journal of Insect Conservation 23: 15-28. [Plateforme TE]

Eugenia Nunez-Valdez M, Lanois A, Pages S, Duvic B, Gaudriault S (2019) Inhibition of Spodoptera frugiperda phenoloxidase activity by the products of the Xenorhabdus rhabduscin gene cluster. PLoS One 14 (2): e0212809. [Plateforme q-PCR haut débit]

Faivre B, Bellenger J, Rieu A, Guivier E, Galan M, Ollivier A, Poloni L, Sorci G (2019) Disentangling the effect of host genetics and gut microbiota on resistance to an intestinal parasite. International Journal of Parasitology 49 (11): 873-883. [Plateforme GenSeq]

Ferreira-Cardoso S, Delsuc F, Hautier L (2019) Evolutionary tinkering of the mandibular canal linked to convergent regression of teeth in placental mammals. Current Biology 29 (3): 468-475. [Plateforme Microtomographie RX]

Fontès H, Gazaix A, Papuga G (2019) Heterogeneous forest structures favor persistence of the grassland Mediterranean geophyte Gagea lacaitae. Botany Letters 166 (4): 487–498. [Plateforme PACE]

François S, Mutuel D, Duncan A, Rodrigues L, Danzelle C, Lefevre S, Santos I, Frayssinet M, Fernandez E, Filloux D, Roumagnac P, Froissart R, Ogliastro M (2019) A new prevalent Densovirus discovered in Acari. Insight from metagenomics in viral communities associated with two-spotted mite (Tetranychus urticae) populations. Viruses 11 (3): 233. [Plateforme q-PCR haut débit]

Fréville H, Roumet P, Rode NO, Rocher A, Latreille M, Muller MH, David J (2019) Preferential helping to relatives: A potential mechanism responsible for lower yield of crop variety mixtures? Evolutionary Applications 12 (9): 1837-1849. [Post-doctorat Cemeb]

Galkowski C, Aubert C, Blatrix R (2019) Aphaenogaster ichnusa santschi, 1925, bona species, and redescription of Aphaenogaster subterranea (Latreille, 1798) (Hymenoptera, Formicidae). Sociobiology 66: 420-425. [Plateforme TE]

Gamble A, Garnier R, Jaeger A, Gantelet H, Thibault E, Tortosa P, Bourret V, Thiebot J-B, Delord K, Weimerskirch H, Tornos J, Barbraud C, Boulinier T (2019) Exposure of breeding albatrosses to the agent of avian cholera: dynamics of antibody levels and ecological implications. Oecologia 189 (4): 939-949. [Post-doctorat Cemeb]

Garba M, Loiseau A, Tatard C, Benoit L, Gauthier N (2019) Patterns and drivers of genetic diversity and structure in the biological control parasitoid Habrobracon hebetor in Niger. Bulletin of Entomological Research 109 (6): 794-811. [Plateforme GenSeq]

Garnier E, Vile D, Roumet C, Lavorel S, Grigulis K, Navas M-L, Lloret F (2019) Inter- and intra-specific trait shifts among sites differing in drought conditions at the north western edge of the Mediterranean Region. Flora 254: 147-160. [Projet exploratoire Cemeb & Plateforme TE]

Gaubert P, Justy F, Mo G, Aguilar A, Danyer E, Borrell A, Dendrinos P, Öztürk B, Improta R, Tonay AM, Karamanlidis AA (2019) Insights from 180 years of mitochondrial variability in the endangered Mediterranean monk seal (Monachus monachus). Marine Mammal Science 35 (4): 1489-1511. [Plateforme ADN dégradé]

Gauthier P, Bernard C, Thompson JD (2019a) Exploring vulnerability of listed Mediterranean plants in relation to risks of population loss. Journal for Nature Conservation 51: 125736. [Plateforme TE]

Gauthier P, Pons V, Fisogni A, Murru V, Berjano R, Dessena S, Maccioni A, Chelo C, de Manincor N, Doncieux A, Papuga G, Thompson JD (2019b) Assessing vulnerability of listed Mediterranean plants based on population monitoring. Journal for Nature Conservation 52: 125758. [Plateforme TE]

Gavinet J, Ourcival J-M, Limousin J-M (2019) Rainfall exclusion and thinning can alter the relationships between forest functioning and drought. New Phytologist 223: 1267-1279. [Plateforme TE]

Geoffroy F, Baumard N, Andre JB (2019) Why cooperation is not running away. Journal of Evolutionary Biology 32 (10): 1069-1081. [Plateforme MBB]

Gervasi V, Linnell JDC, Broseth H, Gimenez O (2019) Failure to coordinate management in trans-boundary populations hinders the achievement of national management goals: the case of wolverines in Scandinavia. Journal of Applied Ecology 56 (8): 1905-1915. [Post-doctorat Cemeb]

Giska I, Farelo L, Pimenta J, Seixas FA, Ferreira MS, Marques JP, Miranda I, Letty J, Jenny H, Hacklander K, Magnussen E, Melo-Ferreira J (2019) Introgression drives repeated evolution of winter coat color polymorphism in hares. Proceedings of the National Academy of Sciences, USA 116 (48): 24150-24156. [Plateforme MBB]

Godefroy N, Le Goff E, Martinand-Mari C, Belkhir K, Vacelet J, Baghdiguian S (2019) Sponge digestive system diversity and evolution: filter feeding to carnivory. Cell Tissue Research 377 (3): 341-351. [Plateforme MBB]

Hima K, Granjon L, Gauthier P, Ndiaye A, Brouat C, Dobigny G (2019) Population dynamics and genetics of Gerbillus nigeriae in Central Sahel: implications for rodent pest control. Ecology and Evolutionary Biology 4 (4): 45-54. [Plateforme GenSeq]

Houssaye A, Herrel A, Boistel R, Rage JC (2019) Adaptation of the vertebral inner structure to an aquatic life in snakes: Pachyophiid peculiarities in comparison to extant and extinct forms. Comptes Rendus - Palevol 18: 783-799. [Plateforme Microtomographie RX]

Jaramillo C (2019) 140 Million years of tropical biome evolution. In: Gomez J, Pinilla-Chacon AO (eds) The Geology of Colombia, Volume 2 Mesozoic. Bogota, Colombia, pp 1-28 [Chercheur invité CeMEB]

Juhel AS, Barbu CM, Valantin-Morison M, Gauffre B, Leblois R, Olivares J, Franck P (2019) Limited genetic structure and demographic expansion of the Brassicogethes aeneus populations in France and in Europe. Pest Management Science 75 (3): 667-675. [Plateforme MBB]

Kazakou E, Vasseur F, Sartori K, Baron E, Rowe N, Vile D (2019) Secondary metabolites have more influence than morpho-physiological traits on litter decomposability across genotypes of Arabidopsis thaliana. New Phytologist 224: 1532-1543. [Plateforme TE]

Kjaer L, Skov V, Andersen MT, Aggerholm A, Clair P, Gniot M, Soeby K, Udby L, Dorff MH, Hasselbalch H, Pallisgaard N (2019) Variant-specific discrepancy when quantitating BCR-ABL1 e13a2 and e14a2 transcripts using the Europe Against Cancer qPCR assay. European Journal of Haematology 103 (1): 26-34. [Plateforme q-PCR haut débit]

Klafack S, Fiston-Lavier AS, Bergmann SM, Hammoumi S, Schroder L, Fuchs W, Lusiastuti A, Lee PY, Heredia SV, Master student consortium, Gosselin-Grenet AS, Avarre JC (2019) Cyprinid herpesvirus 3 evolves in vitro through an assemblage of haplotypes that alternatively become dominant or under-represented. Viruses 11 (8): E754. [Plateforme GenSeq, Plateforme MBB, Plateforme q-PCR haut débit & Projet exploratoire Cemeb]

Kokolo B, Atteke C, Mintsa BAE, Ibrahim B, McKey D, Blatrix R (2019) Congeneric mutualist ant symbionts (Tetraponera, Pseudomyrmecinae) differ in level of protection of their myrmecophyte hosts (Barteria, Passifloraceae). Journal of Tropical Ecology 35: 255-259. [Plateforme TE]

Le Bot T, Lescroël A, Fort J, Péron C, Gimenez O, Provost P, Grémillet D (2019) Fishery discards do not compensate natural prey shortage in Northern gannets from the English Channel. Biological Conservation 236: 375-384. [Doctorat Cemeb]

Leauthaud C, Hiernaux P, Musila W, Kergoat L, Grippa M, Duvail S, Albergel J, Rode NO (2019) Influence of floods and growth duration on the productivity of wet grasslands of Echinochloa stagnina (Retz) P. Beauv. in an East African floodplain. Wetlands 39 (5): 935-944. [Post-doctorat Cemeb]

Leclaire S, Chatelain M, Pessato A, Buatois B, Frantz A, Gasparini J (2019) Pigeon odor varies with experimental exposure to trace metal pollution. Ecotoxicology 28 (1): 76-85. [Plateforme PACE]

Madrieres S, Castel G, Murri S, Vulin J, Marianneau P, Charbonnel N (2019) The needs for developing experiments on reservoirs in Hantavirus research: accomplishments, challenges and promises for the future. Viruses 11 (7): 664. [Projet exploratoire Cemeb]

Marivaux L, Salas-Gismondi R, Antoine P-O (2019) 3D model related to the publication: A platyrrhine talus from the early Miocene of Peru (Amazonian Madre de Dios Sub-Andean Zone). MorphoMuseuM 5: e85. [Plateforme Microtomographie RX]

Mártin-Robles N, Morente-López J, Freschet GT, Poorter H, Roumet C, Milla R (2019) Root traits of herbaceous crops: pre-adaptation to cultivation or evolution under domestication? Functional Ecology 33: 273-285. [Plateforme TE]

Mautz BS, Rode NO, Bonduriansky R, Rundle HD (2019) Comparing ageing and the effects of diet supplementation in wild vs. captive antler flies, Protopiophila litigata. Journal of Animal Ecology 88 (12): 1913-1924. [Post-doctorat Cemeb]

Miralles A, Raymond M, Lecointre G (2019) Empathy and compassion toward other species decrease with evolutionary divergence time. Scientific Reports 9 (1): 19555. [Plateforme MBB]

Molinier C, Reisser CMO, Fields PD, Segard A, Galimov Y, Haag CR (2019) Evolution of gene expression during a transition from environmental to genetic sex determination. Molecular Biology and Evolution 36 (7): 1551-1564. [Plateforme GenSeq & Plateforme MBB]

Mourlam M, Orliac MJ (2019a) 3D models related to the publication: Early Evolution of the Ossicular Chain in Cetacea: Into the Middle Ear Gears of a Semi-Aquatic Protocetid Whale. MorphoMuseuM 5: e94. [Plateforme Microtomographie RX]

Mourlam MJ, Orliac MJ (2019b) Early evolution of the ossicular chain in Cetacea: Into the middle ear gears of a semi-aquatic protocetid whale. Proceedings of the Royal Society B: Biological Sciences 286: 1912. [Plateforme Microtomographie RX]

Olazcuaga L, Rode NO, Foucaud J, Facon B, Ravigné V, Ausset A, Leménager N, Loiseau A, Gautier M, Estoup A, Hufbauer RA (2019) Oviposition preference and larval performance of Drosophila suzukii (Diptera: Drosophilidae), spotted-wing Drosophila: effects of fruit identity and composition. Environmental Entomology 48 (4): 867-881. [Post-doctorat Cemeb & [Chercheur invité CeMEB]

Papuga G, Filigheddu R, Gauthier P, Farris E (2019) Variation in floral morphology in a hybrid complex of Cyclamen in Sardinia. Plant Ecology and Diversity 12 (1): 51-61. [Plateforme TE]

Pérez-Escobar OA, Lucas E, Jaramillo C, Monro A, Morris SK, Bogarin D, Greer D, Dodsworth P, Antonelli A (2019) The origin and diversification of the hyperdiverse flora in the Chocó biogeographic region. Frontiers in Plant Science 10: 1328. [Chercheur invité CeMEB]

Perrin W, Jay-Robert P, Buatois B, Tatin L (2019) A comparative analysis of dung beetle assemblages (Coleoptera: Scarabaeidae: Scarabaeinae, Aphodiinae) attracted to sheep and little bustard excrement in Southern France. The Coleopterists Bulletin 73 (1): 185–192. [Plateforme PACE]

Pinharanda A, Rousselle M, Martin SH, Hanly JJ, Davey JW, Kumar S, Galtier N, Jiggins CD (2019) Sexually dimorphic gene expression and transcriptome evolution provide mixed evidence for a fast-Z effect in Heliconius. Journal of Evolutionary Biology 32 (3): 194-204. [Plateforme MBB]

Portanier E, Garel M, Devillard S, Maillard D, Poissant J, Galan M, Benabed S, Poirel MT, Duhayer J, Itty C, Bourgoin G (2019) Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon. BMC Ecology 19: 12 [Plateforme GenSeq]

Potier S, Duriez O, Célérier A, Liegeois J-L, Bonadonna F (2019) Sight or smell: which senses do scavenging raptors use to find food? Animal Cognition 22 (1): 49-59. [Doctorat Cemeb]

Rataud A, Dupraz M, Toty C, Blanchon T, Vittecoq M, Choquet R, McCoy KD (2019) Evaluating functional dispersal and its eco-epidemiological implications in a nest ectoparasite (Version V3.0). PCI Ecology Zenodo 2592114, ver. 3: peer-reviewed and recommended by PCI Ecology. [Projet exploratoire Cemeb]

Riquet F, Liautard-Haag C, Woodall L, Bouza C, Louisy P, Hamer B, Otero-Ferrer F, Aublanc P, Beduneau V, Briard O, Ayari TE, Hochscheid S, Belkhir K, Arnaud-Haond S, Gagnaire P-A, Bierne N (2019) Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages. Evolution 73 (4): 817-835. [Post-doctorat Cemeb]

Rode NO, Estoup A, Bourguet D, Courtier-Orgogozo V, Débarre F (2019) Population management using gene drive: molecular design, models of spread dynamics and assessment of ecological risks. Conservation Genetics 20 (4): 671-690. [Post-doctorat Cemeb]

Roussel S, Tardieu L, Vaissière A-C (2019) Compensation écologique et agriculture : est-ce compatible ? Revue Economique 70 (1): 123-137. [Post-doctorat Cemeb]

Santonja M, Milcu A, Fromin N, Rancon A, Shihan A, Fernandez C, Baldy V, Hättenschwiler S (2019) Temporal shifts in plant diversity effects on carbon and nitrogen dynamics during litter decomposition in a Mediterranean shrubland exposed to reduced precipitation. Ecosystems 22 (5): 939-954. [Plateforme PACE]

Scornavacca C, Belkhir K, Lopez J, Dernat R, Delsuc F, Douzery EJP, Ranwez V (2019) OrthoMaM v10: scaling-up orthologous coding sequence and exon alignments with more than one hundred mammalian genomes. Molecular Biology and Evolution 36 (4): 861-862. [Plateforme MBB]

Sonnier G, Johnson SE, Waller DM, Rapson G (2019) Fragmentation reduces the importance of niche‐based factors relative to dispersal traits in structuring temperate forest understories. Journal of Vegetation Science 31 (1): 75-83. [Chercheur invité CeMEB]

Souquet L, Chevret P, Ganem G, Auffray J-C, Ledevin R, Agret S, Hautier L, Renaud S (2019) Back to the wild: does feralization affect the mandible of non-commensal house mice ( Mus musculus domesticus)? Biological Journal of the Linnean Society 126: 471-486. [Plateforme Microtomographie RX]

Sow A, Brevault T, Benoit L, Chapuis MP, Galan M, Coeur d'acier A, Delvare G, Sembene M, Haran J (2019) Deciphering host-parasitoid interactions and parasitism rates of crop pests using DNA metabarcoding. Scientific Reports 9 (1): 3646. [Plateforme GenSeq]

Tabuce R, Sarr R, Hautier L (2019) 3D model related to the publication: Filling a gap in the proboscidean fossil record: a new genus from the Lutetian of Senegal. MorphoMuseuM 5: e104. [Plateforme Microtomographie RX]

Tanrattana M, Barczi J-F, Decombeix A-L, Meyer-Berthaud B, Wilson J (2019a) A new approach for modeling water transport in fossil plants. IAWA Journal 40 (3): 466. [Projet exploratoire Cemeb]

Tanrattana M, Meyer-Berthaud B, Decombeix A-L (2019b) Callixylon wendtii sp. nov., a new species of archaeopteridalean progymnosperm from the Late Devonian of Anti-Atlas, Morocco. Earth and Environmental Science Transactions of the Royal Society of Edinburgh 108 (4): 373-385. [Projet exploratoire Cemeb]

Thompson JD, Amiot J, Borron C, Linhart YB, Keeefover-Ring K, Gauthier P (2019) Spatial heterogeneity of gall formation in relation to chemotype distribution in Thymus vulgaris. Plant Ecology 220: 777-788. [Plateforme TE]

Tonnabel J, David P, Klein EK, Pannell JR (2019a) Sex-specific selection on plant architecture through "budget" and "direct" effects in experimental populations of the wind-pollinated herb, Mercurialis annua. Evolution 73: 897-912. [Plateforme TE]

Tonnabel J, David P, Pannell JR (2019b) Do metrics of sexual selection conform to Bateman's principles in a wind-pollinated plant? Proceedings of the Royal Society B, Biological Sciences 286 (1905): 20190532. [Plateforme TE]

Tournayre O (2019) Génétique des populations et biologie de la conservation du Grand Rhinolophe. Plumes de Naturalistes 3: 249-258. [Doctorat Cemeb]

Tournayre O, Pons J-B, Leuchtmann M, Leblois R, Piry S, Filippi-Codaccioni O, Loiseau A, Duhayer J, Garin I, Mathews F, Puechmaille S, Charbonnel N, Pontier D (2019) Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum Western range. Ecology and Evolution 9 (21): 12272-12290. [Doctorat Cemeb, Plateforme GenSeq & Plateforme MBB]

van der Geest M, van der Lely JAC, van Gils JA, Piersma T, Lok T (2019) Density-dependent growth of bivalves dominating the intertidal zone of Banc d’Arguin, Mauritania: importance of feeding mode, habitat and season. Marine Ecology Progress Series 610: 51-63. [Post-doctorat Cemeb]

Vasseur F, Fouqueau L, de Vienne D, Nidelet T, Violle C, Weigel D (2019) Nonlinear phenotypic variation uncovers the emergence of heterosis in Arabidopsis thaliana. PLoS Biology 17 (4): e3000214. [Plateforme TE]

Visconti V, Eychenne M, Darboux I (2019) Modulation of antiviral immunity by the ichnovirus HdIV in Spodoptera frugiperda. Molecular Immunology 108: 89-101. [Plateforme q-PCR haut débit]

Waller DM, Keller LF (2019) Inbreeding and inbreeding depression. In:  Oxford Encyclopedia of Evolutionary Biology. doi:10.1093/obo/9780199941728-0124 [Chercheur invité CeMEB]

Wierucka K, Barthes N, Harcourt R, Schaal B, Charrier I, Pitcher BJ (2019a) Chemical fingerprints suggest direct familiarisation rather than phenotype matching during olfactory recognition in Australian sea lions (Neophoca cinerea). Journal of Experimental Marine Biology and Ecology 517: 49-53. [Plateforme MBB & Plateforme PACE]

Wierucka K, Barthes N, Pitcher BJ, Schaal B, Charrier I, Harcourt RG (2019b) Chemical profiles of integumentary and glandular substrates in Australian sea lion pups (Neophoca cinerea). Chemical Senses 44 (3): 205-214. [Plateforme PACE & Plateforme MBB]